Gene table of TRIM28 : tripartite motif containing 28

Gene-disease associations table

Disease IDDisease nameSource of annotation with TRIM28OMIM linkNumber of associated genesgenes
114500COLORECTAL CANCERClinVar link to OMIM 30TLR4, RAD54B, PTPRJ, TP53, EP300, PTPN12, ODC1, FLCN, TLR2, BAX, PLA2G2A, AURKA, NRAS, APC, MCC, TRIM28, MLH3, AKT1, MT-CO1, AXIN2, CTNNB1, PDGFRL, PIK3CA, KAT5, DCC, BRAF, CCND1, FGFR3, DLC1, BUB1B

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Annotation of the gene TRIM28

Associated genes in ENSEMBL
Associated proteins - SwissProt Accession ID
Associated PDB IDs
Cytogenetic Band
Tandem repeats annotation
Transcription regulation as annotated in TRRUST

It is a TF of the genes:

Associated KEGG pathways
Associated REACTOME pathways
REACTOME pathwayREACTOME IDREACTOME IC
Generic Transcription PathwayR-HSA-2124363.86
Gene ExpressionR-HSA-741602.72
Associated GO terms for Molecular function
GO termGO IDGO IC
ubiquitin-like protein ligase bindingGO:00443894.15
transcription coactivator activityGO:00037134.04
enzyme bindingGO:00198992.27
transcription factor activity, RNA polymerase II transcription factor bindingGO:00010764.84
macromolecular complex bindingGO:00448772.61
bindingGO:00054880.18
nucleic acid bindingGO:00036761.44
DNA bindingGO:00036771.92
transcriptional repressor activity, RNA polymerase II activating transcription factor bindingGO:00988115.77
heterocyclic compound bindingGO:19013631.06
ubiquitin-like protein transferase activityGO:00197873.69
sequence-specific DNA bindingGO:00435652.79
transcriptional repressor activity, RNA polymerase II transcription factor bindingGO:00011915.28
transcriptional activator activity, RNA polymerase II transcription factor bindingGO:00011905.77
transition metal ion bindingGO:00469142.48
promoter-specific chromatin bindingGO:19908417.34
transcription corepressor activityGO:00037144.33
zinc ion bindingGO:00082702.66
transcription cofactor activityGO:00037123.44
ion bindingGO:00431671.36
transferase activityGO:00167401.95
Krueppel-associated box domain bindingGO:00358519.74
transcription factor activity, transcription factor bindingGO:00009893.36
transcription factor activity, protein bindingGO:00009883.35
protein kinase activityGO:00046723.27
metal ion bindingGO:00468721.41
cation bindingGO:00431691.4
poly(A) RNA bindingGO:00448222.69
kinase activityGO:00163012.93
chromo shadow domain bindingGO:00700877.95
RNA polymerase II transcription cofactor activityGO:00011045.22
RNA polymerase II transcription coactivator activityGO:00011056.15
protein domain specific bindingGO:00199043.32
ubiquitin-protein transferase activityGO:00048423.73
ubiquitin protein ligase bindingGO:00316254.17
catalytic activityGO:00038241.05
transcription factor activity, sequence-specific DNA bindingGO:00037002.65
organic cyclic compound bindingGO:00971591.05
phosphotransferase activity, alcohol group as acceptorGO:00167733.08
RNA bindingGO:00037232.36
protein bindingGO:00055150.46
transferase activity, transferring phosphorus-containing groupsGO:00167722.77
chromatin bindingGO:00036823.64
ligase activityGO:00168743.72
nucleic acid binding transcription factor activityGO:00010712.65